YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|34496118, gi|...
Organism: Chromobacterium violaceum ATCC 12472
Length: 263 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34496118, gi|....

Description E-value Query
Range
Subject
Range
gi|196251628, gi... - gi|196251628|ref|ZP_03150296.1| Cobyrinic acid ac-diamide synthase [Clostridium thermocellum DSM 415...
gi|125974862, gi... - gi|67874869|ref|ZP_00504449.1| ATPase, ParA type [Clostridium thermocellum ATCC 27405], gi|67850972|...
230.0 [0..1] [256..1]

Back

Predicted Domain #1
Region A:
Residues: [1-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPRVIAVAN QKGGVGKTTT VVNLAAGLAE LGRRVLIVDL DPQGNATMGS GIAKQSLEKS  60
   61 GYDVLLGEAT IEEARQDAKA GGYQVLPANR NLGGAELELV NELAREARLK NALAEVAGQY 120
  121 DYVLIDSPPS LNLLTLNGLV AADSVLIPMV CEYYALEGLS DLVATLRKVR LAVNPKIEIM 180
  181 GLLRTMFDAR NNLSQQVSEQ LARHFGEKVF QTVIPRNVRL AEAPSHGLPG LVYDRSSRGA 240
  241 QAYLALAQEL VERLEPATAT PTV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.221849
Match: 1wcv1
Description: Structure of the bacterial chromosome segregation protein Soj
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle