YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|34495800, gi|...
Organism: Chromobacterium violaceum ATCC 12472
Length: 208 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34495800, gi|....

Description E-value Query
Range
Subject
Range
gi|32029875, gi|... - gi|32029875|ref|ZP_00132829.1| COG4384: Mu-like prophage protein gp45 [Haemophilus somnus 2336], gi|...
201.0 [0..2] [208..5]

Back

Predicted Domain #1
Region A:
Residues: [1-103]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWHEVDQRIR RAFSNVRQGF RAVLTHVDSD GGVQAAQADA LAGERLQDAE LFQHYGYTSN  60
   61 PPPGSMAMVL PLGGRTSHSV VIATEHGSYR LQSLQPGEVA LYS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.11
Match: 2p5zX
Description: No description for 2p5zX was found.

Predicted Domain #2
Region A:
Residues: [104-208]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DEGSKIVLKR GRIIAVECDT FQLDCKTWQV NASEQASFTT PTLNTSAQFV AQGQISGNGG  60
   61 LAIQGGGGAK VTGSVSASGD VKAGGISLQG HIHNGDSGGV TSPPK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle