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View Structure Prediction Details

Protein: gi|34101538, gi|...
Organism: Chromobacterium violaceum ATCC 12472
Length: 252 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34101538, gi|....

Description E-value Query
Range
Subject
Range
gi|93353553, gi|... - gi|94309701|ref|YP_582911.1| glycosyl transferase family protein [Ralstonia metallidurans CH34], gi|...
182.0 [0..3] [247..1]

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Predicted Domain #1
Region A:
Residues: [1-252]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVAISAVLI TKNAGKQLEQ CLQSLSFADE IVVVDSGSSD STLAIASAYK AKVIHQEWLG  60
   61 FGPQKQFAVS QASHDWVLCL DADEYLSEEL SLSINKIREN PQAAAYRFPR CNRFMGRFLK 120
  121 HGEGYPDWSL RLFDRHRARW SDDAVHEYVI CDGPVEKLAG DLMHESGEDI ALYLSKQNRY 180
  181 TSLQAEQLHA RGKKVGAGKL LFSPLLRFFK FYFVRRGFLD GLPGLVHISI GCFNSYIKYA 240
  241 KLIELRRLDK DR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 17.0
Match: 1xhbA
Description: The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.25720704697246 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 2.04393180556087 bayes_pls_golite062009
transferase activity 1.59927234362992 bayes_pls_golite062009
UDP-glycosyltransferase activity 1.51711005399931 bayes_pls_golite062009
cytidylyltransferase activity 1.46439247968206 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.21894113759929 bayes_pls_golite062009
nucleotidyltransferase activity 0.67147527259372 bayes_pls_golite062009
3-deoxy-manno-octulosonate cytidylyltransferase activity 0.65875226012175 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.59538793794626 bayes_pls_golite062009
uridylyltransferase activity 0.54930147038803 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 0.48277064848483 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.38929738612511 bayes_pls_golite062009
glucose-1-phosphate thymidylyltransferase activity 0.204810937394121 bayes_pls_golite062009
guanylyltransferase activity 0.14847697203788 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.109123661808497 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 0.10541627748542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle