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View Structure Prediction Details

Protein: gi|34495643, gi|...
Organism: Chromobacterium violaceum ATCC 12472
Length: 209 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34495643, gi|....

Description E-value Query
Range
Subject
Range
gi|67665704, gi|... - gi|67665704|ref|ZP_00462964.1| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia HI2424]...
gi|67093808, gi|... - gi|67658720|ref|ZP_00456090.1| Lysine exporter protein (LYSE/YGGA) [Burkholderia cenocepacia AU 1054...
168.0 [0..2] [205..246]

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Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWQTWLLFV TTVFFVSATP GPNMLLAMTH GIHYGVRRTL MTCFGLMTAL GLIMLGSVAG  60
   61 LGALLATSEL LFSIVKYAGA LYLVYLGVKT WRSLPQPVAE LREDDSGRHG PWALFRRGFL 120
  121 VAMSNPKAFI FFTALFPQFM NAHQPQGPQL AILAATFYLI ESCWQLTYAS SGARLARWLN 180
  181 SARRLRLVNR FSGGAFVGAG LLLTGLSRQ

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.29243
Match: PF01810.9
Description: No description for PF01810.9 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle