YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|34101355, gi|...
Organism: Chromobacterium violaceum ATCC 12472
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34101355, gi|....

Description E-value Query
Range
Subject
Range
gi|1657235, gi|1... - pir||T09140 serine O-acetyltransferase (EC 2.3.1.30) - spinach, gi|1657235|dbj|BAA13635.1| serine a...
265.0 [0..1] [258..73]

Back

Predicted Domain #1
Region A:
Residues: [1-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTLVDPLW SAIRDETLAA VNDEPLLASF LHMTVLRHAT LEDVLAFHLS TKLASPVMDP  60
   61 RALQELFREA FQADPAISAA LRADIRACFE RDPACDRYST PLLYFKGFHA IQSQRVTHWL 120
  121 WQQGRTTLAL FLQNRISEVT GADIHPAARV GQGVMLDHGT GLVVGETAVI GNNVSILHGV 180
  181 TLGGSGKDRG DRHPKIGDGV MLGAGAAVLG NIRVGECAKV GAGSVVLEDV PPHATVAGVP 240
  241 ARVVAQACPG TPALDMDQRV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.522879
Match: 1t3dA
Description: Crystal structure of Serine Acetyltransferase from E.coli at 2.2A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
serine O-acetyltransferase activity 7.87896510108566 bayes_pls_golite062009
serine O-acyltransferase activity 7.87896510108566 bayes_pls_golite062009
O-acyltransferase activity 3.5929335433661 bayes_pls_golite062009
O-acetyltransferase activity 2.49457770952472 bayes_pls_golite062009
catalytic activity 2.22811944286398 bayes_pls_golite062009
transferase activity 1.82656452828944 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.61334532879528 bayes_pls_golite062009
acyltransferase activity 1.61097318205269 bayes_pls_golite062009
transferase activity, transferring acyl groups 1.61041958820284 bayes_pls_golite062009
acetyltransferase activity 0.426204902618823 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle