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View Structure Prediction Details

Protein: gi|113535131, gi...
Organism: Oryza sativa Japonica Group
Length: 804 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|113535131, gi....

Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLSSSASRR EVGGGGAASS TKSGELSLSK VASVAIRESS GSGSGGISKS SELLSRAGTM  60
   61 AAAREAAAAA VHHEGWMVRY GRRKIGRSFF HTRYFVLDSR LLAYYKKKPK DNMVPLKSLL 120
  121 IDGNCRVEDR GLKTHHGQMV YVLCVYNKKE KEHQITMGAY DIEDALAWKK NIELIIDQQE 180
  181 NMTSKNRKAF ASMDFDTELG GQFIFSDHDS AAEDEEERPM LIRRTTIGNG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.69897
Match: 3byiA
Description: No description for 3byiA was found.

Predicted Domain #2
Region A:
Residues: [231-490]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPESIHDWTK EHDIGPPNQI DPIQVSSKKN WRLLRCQNGL RIFEELLEFD YLARSCSRAM  60
   61 RAVGVVEATC EAIFGLVMSM DVTRYEWDCS FRYGSLVEEV DGHTAILYHK LQLHWCPMLV 120
  121 WPRDLCYVRY WRRNDDGSYV VLFRSTEHPN CGRQKGYVRA FIESGGFKIS PLKCRNGRPR 180
  181 TQVQHLMQID LRGWLLNYSP SFQYHSLLQI QNCVAGLREY FSQTDETHIT PRIPVMENMV 240
  241 DTSAVQKDDK KSTEEVDSKT 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.045757
Match: 2r55A
Description: No description for 2r55A was found.

Predicted Domain #3
Region A:
Residues: [491-679]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTPDRGQADS KNMGIIDEET DEDEDYQVPE ANIEEDPNKD AKRADEPPEK IDLSCFSGIL  60
   61 RCDADEKSRN CWTVPDSKLF KVRSKNFPHD KSKIPAASYL MELAAIDWFK DSKRMDNVGR 120
  121 QKGCVAQVAA EKGMHTFVAN IQIPGSTHYS LVMYFVTKSL KKGSLLQRFF DGDDEFRNSR 180
  181 LKLIPSVPK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [680-804]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSWIVRQSVG STPCLLGKAV DCSYVRGAGY LEVDVDIGSS AVANGVLGLV FGVVTTLVVD  60
   61 MAFLIQANTY EELPEQVIGA ARLAHVEPAA AIVPQDLTPP PPALADDDNA AASSSEDDHL 120
  121 SKKTN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle