| Protein: | gi|215701373, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 394 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215701373, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
265.0 | [0..109] | [393..105] |
|
|
240.0 | [0..126] | [386..107] |
|
|
200.0 | [0..104] | [392..7] |
|
|
200.0 | [0..143] | [390..2] |
|
|
199.0 | [0..126] | [389..9] |
|
|
198.0 | [0..154] | [392..10] |
|
|
197.0 | [0..150] | [392..5] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MEPLVRSPVT SPPAIAGAAS PSPSRSLSRR RAPPDAAAFP KPWVIPSSSV KSAACLQLQQ 60
61 ARAPRRCARL LASAAEGGRR GEEGSPASS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.392 | N/A | N/A | a.24.18 | Description not found. |
| View | Download | 0.328 | N/A | N/A | d.234.1 | Proguanylin |
| View | Download | 0.328 | N/A | N/A | d.234.1 | Proguanylin |
| View | Download | 0.272 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.271 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.271 | N/A | N/A | c.44.2 | Enzyme IIB-cellobiose |
| View | Download | 0.265 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.244 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.225 | N/A | N/A | a.60.6 | DNA polymerase beta, N-terminal domain-like |
| View | Download | 0.222 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
|
Region A: Residues: [90-146] |
1 11 21 31 41 51
| | | | | |
1 SDADDQAEAL PFLESDSHHT QTSKHGESGG SNSGGSRAGL FRTPISGGVH TATSVHD
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.791 | a.4.1 | Homeodomain-like |
| View | Download | 0.600 | a.4.1 | Homeodomain-like |
| View | Download | 0.571 | a.4.1 | Homeodomain-like |
| View | Download | 0.503 | a.4.1 | Homeodomain-like |
| View | Download | 0.415 | a.4.5 | "Winged helix" DNA-binding domain |
|
Region A: Residues: [147-394] |
1 11 21 31 41 51
| | | | | |
1 LPPPARAVRN LMEQARFAHL CTVMSRMHHR RAGYPFGSLV DFAPDPMGHP IFSLSPLAIH 60
61 TRNLLEDPRC TVVVQVPGWS GLSNARVTIF GDVVPLPADL QEWAHQQYVL KHQQWASHQW 120
121 GNFYYYKMQT ISDIYFIGGF GTVAWLDVKE YEALKPDKIA TDGGEQSLKE LNAMYSKPLK 180
181 ELLSTEIEVD DAALISIDSK GIDIRVRQGA QFNIQRIAFE LHYSVETLEE AKEAIRRILG 240
241 KSRWHAKF
|
| Detection Method: | |
| Confidence: | 47.522879 |
| Match: | 2arzA |
| Description: | Crystal structure of hypothetical protein from Pseudomonas aeruginosa |
Matching Structure (courtesy of the PDB): |
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