| Protein: | STLP4_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 439 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STLP4_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
435.0 | [0..1] | [439..1] |
|
|
414.0 | [0..1] | [436..1] |
|
|
413.0 | [0..1] | [439..9] |
|
|
394.0 | [0..1] | [436..1] |
|
|
384.0 | [0..15] | [435..15] |
|
|
353.0 | [0..3] | [437..19] |
|
|
350.0 | [0..2] | [437..8] |
|
Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MRVLPLALAA AIFSGVTAIL VYLSGLSSYG GARVSDADLA ALGALQSGFS KCVDANGLGL 60
61 KAIPGEDYCR VVIQYPSDTD SKWK
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.387 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.364 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.328 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.327 | N/A | N/A | g.16.1 | Trefoil |
| View | Download | 0.326 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.315 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.311 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.305 | N/A | N/A | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.285 | N/A | N/A | d.205.1 | GTP cyclohydrolase I feedback regulatory protein, GFRP |
| View | Download | 0.249 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [85-161] |
1 11 21 31 41 51
| | | | | |
1 DPKTGEPEGL SFEFNLCEAV ASWEQVRNST TILTKEYIDA LPNGWEEYAW RRINKGIHLN 60
61 KCQNRTLCME KLSLVLP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.759 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.599 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.599 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.593 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.593 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.584 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.584 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.579 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.531 | f.17.1 | F1F0 ATP synthase subunit C |
|
Region A: Residues: [162-306] |
1 11 21 31 41 51
| | | | | |
1 ETPPYVPRQF GRCAVVGNSG DLLKTKFGDE IDSYDVVIRE NGAPIQNYTE YVGTKSTFRL 60
61 LNRGSAKALD KVVELDETKK EALIVKTTIH DIMNQMIREI PITNPVYLML GTSFGSSAKG 120
121 TGLKALEFAL SMCDSVDMYG FTVDP
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.728 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.707 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.654 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.596 | N/A | N/A | c.23.13 | Type II 3-dehydroquinate dehydratase |
| View | Download | 0.576 | N/A | N/A | a.1.1 | Globin-like |
|
Region A: Residues: [307-439] |
1 11 21 31 41 51
| | | | | |
1 GYKEWTRYFS ESRKGHTPLH GRAYYQMMEC LGLVKIHSPM RGDPGRVVKW APTKDTIEAA 60
61 RVASEKLLKR PGAGSEGPLS SCTMIKKREK GKTPKRSVVR HAALKHLEYM RGATRYPLER 120
121 NAGGGYLCMI NER
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.438 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.438 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.407 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.407 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.372 | N/A | N/A | a.170.1 | BRCA2 helical domain |
| View | Download | 0.372 | N/A | N/A | a.170.1 | BRCA2 helical domain |
| View | Download | 0.342 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.322 | N/A | N/A | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.308 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.306 | N/A | N/A | a.39.1 | EF-hand |
