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View Structure Prediction Details

Protein: gi|113535187, gi...
Organism: Oryza sativa Japonica Group
Length: 1040 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|113535187, gi....

Predicted Domain #1
Region A:
Residues: [1-675]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEATVPVLLL VTVLSLILPS GIGAAAAGDE RSALLALKAG FVDTVSALAD WTDGGKASPH  60
   61 CKWTGVGCNA AGLVDRLELS GKNLSGKVAD DVFRLPALAV LNISNNAFAT TLPKSLPSLP 120
  121 SLKVFDVSQN SFEGGFPAGL GGCADLVAVN ASGNNFAGPL PEDLANATSL ETIDMRGSFF 180
  181 GGAIPAAYRS LTKLKFLGLS GNNITGKIPP EIGEMESLES LIIGYNELEG GIPPELGNLA 240
  241 NLQYLDLAVG NLDGPIPPEL GKLPALTSLY LYKNNLEGKI PPELGNISTL VFLDLSDNAF 300
  301 TGAIPDEVAQ LSHLRLLNLM CNHLDGVVPA AIGDMPKLEV LELWNNSLTG SLPASLGRSS 360
  361 PLQWVDVSSN GFTGGIPAGI CDGKALIKLI MFNNGFTGGI PAGLASCASL VRVRVHGNRL 420
  421 NGTIPVGFGK LPLLQRLELA GNDLSGEIPG DLASSASLSF IDVSRNHLQY SIPSSLFTIP 480
  481 TLQSFLASDN MISGELPDQF QDCPALAALD LSNNRLAGAI PSSLASCQRL VKLNLRRNKL 540
  541 AGEIPRSLAN MPALAILDLS SNVLTGGIPE NFGSSPALET LNLAYNNLTG PVPGNGVLRS 600
  601 INPDELAGNA GLCGGVLPPC SGSRSTAAGP RSRGSARLRH IAVGWLVGMV AVVAAFAALF 660
  661 GGHYAYRRWY VDGAG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.0
Match: 2z64A
Description: No description for 2z64A was found.

Predicted Domain #2
Region A:
Residues: [676-1040]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CCDDENLGGE SGAWPWRLTA FQRLGFTCAE VLACVKEANV VGMGATGVVY KAELPRARAV  60
   61 IAVKKLWRPA AAAEAAAAAP ELTAEVLKEV GLLGRLRHRN IVRLLGYMHN EADAMMLYEF 120
  121 MPNGSLWEAL HGPPERRTLV DWVSRYDVAA GVAQGLAYLH HDCHPPVIHR DIKSNNILLD 180
  181 ANMEARIADF GLARALGRAG ESVSVVAGSY GYIAPEYGYT MKVDQKSDTY SYGVVLMELI 240
  241 TGRRAVEAAF GEGQDIVGWV RNKIRSNTVE DHLDGQLVGA GCPHVREEML LVLRIAVLCT 300
  301 ARLPRDRPSM RDVITMLGEA KPRRKSGSST GSASAKAPTP APPAVAAVVD KDKPVFTTTP 360
  361 DSDYA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.39794
Match: 2nruA
Description: No description for 2nruA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle