YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|9656564, gi\|1...
Organism:	Vibrio cholerae O1 biovar El Tor str. N16961
Length:	110 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9656564, gi|1....

Description	E-value	Query Range	Subject Range
gi\|75907835, gi\|... - gi\|75907835\|ref\|YP_322131.1\| non-ribosomal peptide synthase [Anabaena variabilis ATCC 29413], gi\|757...	113.0	[0..3]	[110..1037]
BACA_BACLI - Bacitracin synthase 1 OS=Bacillus licheniformis GN=bacA PE=3 SV=1	111.0	[0..3]	[110..511]
gi\|82502195 - gi\|82502195\|gb\|ABB80123.1\| SubA [Bacillus subtilis]	111.0	[0..3]	[110..511]
gi\|9715733 - gi\|9715733\|emb\|CAC01603.1\| peptide synthetase [Anabaena circinalis 90]	110.0	[0..3]	[105..2135]
gi\|163943331, gi... - gi\|89203969\|ref\|ZP_01182548.1\| Amino acid adenylation [Bacillus weihenstephanensis KBAB4], gi\|891581...	110.0	[0..4]	[110..943]
gi\|6563399 - gi\|6563399\|gb\|AAF17280.1\| NosC [Nostoc sp. GSV224]	109.0	[0..4]	[110..3198]
gi\|53686777 - gi\|53686777\|ref\|ZP_00106169.2\| COG1020: Non-ribosomal peptide synthetase modules and related protein...	109.0	[0..3]	[109..318]
gi\|228655654, gi... - gi\|229127889\|ref\|ZP_04256875.1\| Peptide synthetase [Bacillus cereus BDRD-Cer4], gi\|228655654\|gb\|EEL1... gi\|30020584, gi\|... - gi\|30020584\|ref\|NP_832215.1\| peptide synthetase [Bacillus cereus ATCC 14579], gi\|29896135\|gb\|AAP0941...	108.0	[0..4]	[108..1992]

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Predicted Domain #1

Region A:
Residues: [1-110]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPETSRLQ LSLVRINYGI IALGEICKGK EKMSNIEERV KKIIVEQLGV DEAEVKNESS  60
   61 FVEDLGADSL DTVELVMALE EEFDTEIPDE EAEKITTVQA AIDYVTSNAQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.69897
Match:	2ehsA
Description:	No description for 2ehsA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits