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View Structure Prediction Details

Protein: gi|47497812, gi|...
Organism: Oryza sativa Japonica Group
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|47497812, gi|....

Description E-value Query
Range
Subject
Range
gi|73946924 - gi|73946924|ref|XP_541451.2| PREDICTED: similar to alpha isoform of regulatory subunit A, protein ph...
392.0 [0..2] [577..4]

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Predicted Domain #1
Region A:
Residues: [1-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASMDEPLYP IAILIDELKN EDIQLRLNSI RRLSTIARAL GEERTRKELI PFLSENNDDE  60
   61 DEVLLAMAEE LGVFIPYVGG VEHAHVLLPP LETLCTVEET CVRDKAVESL CRIGAQMKES 120
  121 DIVDWFVPVV KRLAAGEWFT ARVSSCGLFH IAYPSAPDQL KAELRTIYGQ LCQDDMPMVR 180
  181 RAAASNLGKF AATVEQNYLK TEVMSIFDDL TQDDQDSVRL LAVEGCAALG KLLEPQDCVA 240
  241 HILPVIVNFS QDKSWRVRYM VANQLYELCE AVGPEHSREQ LVPAYVRLLR DNEAEVRIAA 300
  301 AGKVTKFCRI LSPQLAIQHI LPCVKELSSD SSQHVRSALA SVIMGMAPVL GKEATIEQLL 360
  361 PIFLSLLKDE FPDVRLNIIS KLDQVNQVIG IDLLSQSLLP AIVELAEDRH WRVRLAIIEY 420
  421 IPLLASQLGV GFFDDKLGAL CMQWLEDKVF SIRDAAANNL KRLAEEFGPE WAMQHIIPQV 480
  481 LEKINNPHYL YRMTILQAIS LLAPVMGAEI TCQQLLPVVI NSSKDRVPNI KFNVAKVLQA 540
  541 LIPILDQSVV EKNVKPCLVE LSEDPDVDVR YYANQALQAC DQIMMSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 109.0
Match: 2iaeA
Description: No description for 2iaeA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle