YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|222613318, gi...
Organism: Oryza sativa Japonica Group
Length: 217 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|222613318, gi....

Description E-value Query
Range
Subject
Range
gi|34784081, gi|... - gi|41053750|ref|NP_956875.1| AMMECR1 protein [Danio rerio], gi|34784081|gb|AAH56704.1| Zgc:66100 [Da...
317.0 [0..2] [213..100]

Back

Predicted Domain #1
Region A:
Residues: [1-217]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVATEEMAV YCFDALVSHY SGDQPPPPAF EEGIHPLFVT WKKATNGSEP RLRGCIGTLE  60
   61 ARQIVTGFKE YALTSALRDR RFPPIQSKEL PYLECTVSIL TEYETALNHL DWEVGKHGLI 120
  121 IEFTDPDYNM RRSATYLPEV AAHEGWTHLE TIDSLMRKAG YNGTITDSLR KKLRVTRYQS 180
  181 TLYTMHYGEY AAYVKKNRGA APEINGAPII NGFKPGH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.154902
Match: 1vajA
Description: Crystal Structure of Uncharacterized Protein PH0010 From Pyrococcus horikoshii
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle