| Protein: | gi|215678662, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 466 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215678662, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
349.0 | [0..1] | [465..95] |
|
|
348.0 | [0..7] | [464..6] |
|
|
347.0 | [0..1] | [465..180] |
|
|
340.0 | [0..1] | [465..76] |
|
|
338.0 | [0..1] | [465..13] |
|
|
335.0 | [0..1] | [465..9] |
|
|
335.0 | [0..1] | [465..9] |
|
Region A: Residues: [1-75] |
1 11 21 31 41 51
| | | | | |
1 MAETVDDKVS YFQAVTGISD HDLCTEILAA HNWDLQLAVS SITANPSSPD PAPSAPLPPL 60
61 APREADLVAP HLPPP
|
| Detection Method: |  |
| Confidence: | 10.0 |
| Match: | 2damA |
| Description: | No description for 2damA was found. |
|
Region A: Residues: [76-166] |
1 11 21 31 41 51
| | | | | |
1 PQQQQQQQQP GIAWKLVTLP FYVVSGGVGL IAGSIRLGAW VAGGVLSRSL SILGLAQGGG 60
61 GGGDRLLELP PSAAEAADFV AEFEREFGAG R
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.434 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.386 | d.223.1 | Polo domain |
| View | Download | 0.382 | a.7.14 | Description not found. |
| View | Download | 0.382 | a.8.11 | Description not found. |
| View | Download | 0.375 | a.4.1 | Homeodomain-like |
| View | Download | 0.367 | d.15.1 | Ubiquitin-like |
| View | Download | 0.364 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.361 | a.7.6 | Ribosomal protein S20 |
| View | Download | 0.323 | a.4.12 | TrpR-like |
|
Region A: Residues: [167-267] |
1 11 21 31 41 51
| | | | | |
1 GPHFVAEGFA DALQRAQREY KLLFVYLHSP DHPDTPAFCG GCLCAEPVAA FIDENFVAWG 60
61 GSIRRTEGFK MSNSLNASRF PFCAVVMAST NQRIVLLRQI E
|
| Detection Method: | |
| Confidence: | 33.045757 |
| Match: | 2dlxA |
| Description: | No description for 2dlxA was found. |
|
Region A: Residues: [268-382] |
1 11 21 31 41 51
| | | | | |
1 GPKSPEEMIT TLQGAVEECS ASLVAARIDA EERLNNQRLR EEQDAAYRAA LEADQARERQ 60
61 RREEQEKRER EAAEAERKRK EEEEAQERAA QEAAEKEAAL ARRRQEKAMA LGAEP
|
| Detection Method: | |
| Confidence: | 5.045757 |
| Match: | 1dg3A |
| Description: | Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [383-466] |
1 11 21 31 41 51
| | | | | |
1 EKGPDVTRVL IRFPTGERKE RRFNSSTTIT SLYDYVDSLD CLKAEKYSLV SNFPRVTYGP 60
61 EKLSQTLEEA GLHPQASLFI EIEQ
|
| Detection Method: | |
| Confidence: | 20.154902 |
| Match: | 1wj4A |
| Description: | Solution structure of the UBX domain of KIAA0794 protein |
Matching Structure (courtesy of the PDB): |
|
