YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: EXPB6_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 275 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for EXPB6_ORYSJ.

Description E-value Query
Range
Subject
Range
EXPB4_ORYSJ - Expansin-B4 OS=Oryza sativa subsp. japonica GN=EXPB4 PE=2 SV=1
gi|125532915 - gi|125532915|gb|EAY79480.1| hypothetical protein OsI_34608 [Oryza sativa Indica Group]
EXPB4_ORYSA - Expansin-B4 precursor (OsEXPB4) (Beta-expansin-4) (OsaEXPb1.7) - Oryza sativa (Rice)
312.0 [0..6] [275..3]

Back

Predicted Domain #1
Region A:
Residues: [1-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARMGSKVA AILAILSVLV VHGSCKGHPV NYNVSDASAY GSGWLPARAT WYGAPTGAGP  60
   61 DDNGGACGFK NVNQYPFSSM TSCGNEPIFK DGKGCGSCYQ IRCNKDPSCS GNIETVIITD 120
  121 MNYYPVARYH FDLSGTAFGA MAKPGLNDKL RHSGIIDIQF RRVPCNYPGL KINFHVEEGS 180
  181 NPVYFAVLVE YEDLDGDVVQ VDLMESKSAY GGATGVWTPM RESWGSIWRL DSNHRLQAPF 240
  241 SLRIRSDSGK TLVANNVIPA NWSPNSNYRS IVQFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.30103
Match: 2hczX
Description: No description for 2hczX was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle