| Protein: | NBS1_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 560 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NBS1_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
381.0 | [0..1] | [560..1] |
|
Region A: Residues: [1-104] |
1 11 21 31 41 51
| | | | | |
1 MVWALTPVDT VRGAQRCYIF AAGTYKVGRK DCDVIVQTDT SISRVHAEIV VEKMVAWDPQ 60
61 SGAPANPSYV RVVDRSKYGT FFNKVQGTQG SRLHKDEDAM LADG
|
| Detection Method: |  |
| Confidence: | 13.69897 |
| Match: | 2jpeA |
| Description: | No description for 2jpeA was found. |
|
Region A: Residues: [105-320] |
1 11 21 31 41 51
| | | | | |
1 DTVTFGTGNA TFRLSFVPIV VFFHGKKSGR ISPCLQAVMT SIGAYATRKW SDECTHVLVD 60
61 ESCSLTPELL DAVLAKKQIV LGDWFKVMAE KNIHTEMPSS TQYIPKLTLD GMEIQVVEIK 120
121 LIESCLAGYT FILGSSEKYK FGDKLHALLE STGAKYLHVD EFCANSQDSG AGENDKDILL 180
181 VPAKSPLEFS KIRGLFPLSK ITDVKLFAAI LSGHLE
|
| Detection Method: | |
| Confidence: | 16.522879 |
| Match: | 1gzhB |
| Description: | 53BP1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [321-560] |
1 11 21 31 41 51
| | | | | |
1 ATAIEPPAYI VASSNSTDET IVVDSDVEID TATSDHTVAA SKSEHHIEHI SDDKKEVVAI 60
61 SEEDAVNLVE AKTSINLHSD QEKDEIVKPM EEDVKVIEKT ATMRGFKVEG EDIPVMTKVP 120
121 KDETLDSRDE TCHVIYTQNL VVKSILQSAR AESIETGGIN FKRFRKRGAV SGNSFKDLIP 180
181 YSREPYRESD YERGTVTDFM REEKKRRQME AIAEDLFNNA KPKKKAAAGS SIHTMLTGRR 240
241
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
