| Protein: | gi|115482288, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 395 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115482288, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..3] | [393..2] |
|
|
354.0 | [0..6] | [392..21] |
|
|
352.0 | [0..6] | [342..87] |
|
|
348.0 | [0..2] | [328..665] |
|
|
347.0 | [0..21] | [379..11] |
|
|
344.0 | [0..12] | [379..2] |
|
|
342.0 | [0..12] | [379..2] |
|
Region A: Residues: [1-68] |
1 11 21 31 41 51
| | | | | |
1 MASEEGEEAN AASSAEEVGR KKPPRHKGKH DKPKPWDDDP NIDHWKIEKF DPSWNEGGML 60
61 EVSSFSTL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.441 | N/A | N/A | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.293 | N/A | N/A | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.275 | N/A | N/A | g.7.1 | Snake toxin-like |
| View | Download | 0.256 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.212 | N/A | N/A | d.93.1 | SH2 domain |
| View | Download | 0.211 | N/A | N/A | a.28.3 | Retrovirus capsid protein C-terminal domain |
|
Region A: Residues: [69-242] |
1 11 21 31 41 51
| | | | | |
1 FPQYREKYLQ EAWPIVKGAL KEFGVACELN LVEGSMTVST TRKTRDPYII VKAKELIKLL 60
61 SRSVPAPQAI KILNDEMSCD IIKIGSIIRN KERFVKRRER LLGPNLSTLK AIEILTGCYI 120
121 LVQGNTVAAM GSWKGLKQVR RVVEDCIKNI KHPVYHIKEL LIKRELAKNP ALAN
|
| Detection Method: | |
| Confidence: | 35.30103 |
| Match: | 1tuaA |
| Description: | Structural genomics, 1.5A crystal structure of a hypothetical protein APE0754 from Aeropyrum pernix |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [243-395] |
1 11 21 31 41 51
| | | | | |
1 ESWDRFLPKF KKKNVKQKKP ITKEKKPYTP FPPPQQPSKI DLELESGEYF MSDKKKSAKK 60
61 WQEKLEKQSE KAEENKRKRE AAFVPPKEDT ATPYESAKST SNNDEIADMA KSLKKKAKEF 120
121 RKSEAQENVR LESYVASNEG SRPKKKHKSS KSK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
