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View Structure Prediction Details

Protein: gi|31432337, gi|...
Organism: Oryza sativa Japonica Group
Length: 297 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|31432337, gi|....

Description E-value Query
Range
Subject
Range
gi|115482220, gi... - gi|115482220|ref|NP_001064703.1| Os10g0443200 [Oryza sativa (japonica cultivar-group)], gi|113639312...
329.0 [0..17] [297..14]

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Predicted Domain #1
Region A:
Residues: [1-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPAATATAA LRLRAAFLSP PPPPAAAAAS AAAASRLLPR RPTASILLLP LRRLCSVPPH  60
   61 AVGDAGTGSS SQPSPVMDAQ FESFRAQLDE SSTLRDRIRA VVSEVESASR VASAALLLVH 120
  121 QPVPLADVLG KAKAQVEVIK GLYSRLAEIL KECPGQYYRY HGDWRSETQA VVSMLAFMHW 180
  181 LETGGLLMHA EAQEKLGLSS GEFGLDVEDY LTGLCFMSND FPRYVVNRVT AGDYDCPRKV 240
  241 LSFLTDLHAS FRMLNLRNDF LRKKFDGMKY DLRRVEEVYY DVKIRGLVPG ESKQEAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 69.0
Match: 1j1jA
Description: Crystal Structure of human Translin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.18404838488611 bayes_pls_golite062009
nucleic acid binding 0.73934887642972 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle