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View Structure Prediction Details

Protein: gi|37534558, gi|...
Organism: Oryza sativa Japonica Group
Length: 369 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37534558, gi|....

Description E-value Query
Range
Subject
Range
gi|115482122, gi... - gi|37534574|ref|NP_921589.1| putative speckle-type protein [Oryza sativa (japonica cultivar-group)],...
301.0 [0..1] [365..1]

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Predicted Domain #1
Region A:
Residues: [1-369]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPAVGRGNP PSRSASSSTI VAETATGYHL LKINGYSLTK ATTPTGSFLP SSPFTVGGHR  60
   61 WNIKYYPNGD DVKTADYISF FLVLEEEETN MGLTVQAKFK FSFANQVKKQ PSLKYRPIKT 120
  121 FNLEDSCGWG YVEFIKRVDL EKSDDLRDDS FTIRCDIVVV REIRTEETTE ILPVESFVPV 180
  181 PPSDMDQQFG DLLETEKGAD VVFEVGGQTF AAHRCVLAAR SPVFRAALYG SMKEGDTDGV 240
  241 VHIEDMEAQV FKLLLRFVYT DSLPEMETEE DVVCQHLLVT ADRYDLHRLK LMCENRLCKY 300
  301 IGVSTVSNIL ALADQHHCDG LKKACFSFLG SPANLSAVVA SDGFKHLSRS CPSLMEELVV 360
  361 MLALPPSHA

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Detection Method: PSI-BLAST
Confidence: 17.221849
Match: 2f1zA
Description: Crystal structure of HAUSP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle