| Protein: | gi|14018055 |
| Organism: | Oryza sativa |
| Length: | 839 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14018055.
| Description | E-value | Query Range |
Subject Range |
|
|
362.0 | [0..9] | [480..520] |
|
|
359.0 | [0..6] | [466..563] |
|
|
358.0 | [0..6] | [466..579] |
|
|
358.0 | [0..6] | [466..584] |
|
|
358.0 | [0..6] | [466..587] |
|
|
358.0 | [0..6] | [466..711] |
|
Region A: Residues: [1-81] |
1 11 21 31 41 51
| | | | | |
1 MVCFGSKALR RKGDKQRCLP EGDIDDSLPM RRGRKDKSEK PRKGGSSSSN RPSAEKAKHG 60
61 RKKSGDGKKS KGRGKSCHSD S
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [82-485] |
1 11 21 31 41 51
| | | | | |
1 SIEMNPGHMK NDNTLLPSKA SKPVTNFLRK RVDPETAKYF LEISYLFDNK EIDLEERATI 60
61 CANALEETKG KELELATDGP ISHTLQVLVE GCELEQLCVF LHNSIESFHI IAVDKFGSHV 120
121 AEAALKSLAT HLEDEASRGI IEDILIRICK VIAGDAANVM SSCYGSHVLR TLLCLCKGVP 180
181 LQSLQDFHTT KRSAVLAERL SCGSTRSGGS DPKNQGCGFS DIFKSFVREM LQNAKDDIAS 240
241 LETDKNSSLV LQTALKLSAG DDHELNYIIS ILLGFDEDDT AQKKDRSEQK NEIIALLEDT 300
301 AYSHLLEVIV EVAPEELRNN MLTGTLKGAL FAISSHHCGN YVVQALVASA KTSDQMEQIW 360
361 DELGSRINEL LELGKAGVVA SILAACQRLE TKRLESSQVL SAAL
|
| Detection Method: | |
| Confidence: | 82.39794 |
| Match: | 1ib2A |
| Description: | Pumilio 1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [486-681] |
1 11 21 31 41 51
| | | | | |
1 SSNSESSDSI VAHMLFLENY LHQKSSWEWP LGAKMSVLGC LMLQSILQYP HQYIRPYVAS 60
61 LLAMDDNKIL QISKDSGGSR VLEAFLCSSA TAKRKFKVFA KLQGHYGEIA MNPSGSFLVE 120
121 KCFTASNFSH KEAIVVELLA VQTELSRTRH GFHLLKKLDV DRYSRRPDQW RASQTSKETT 180
181 QREFQVEFGL SSKGAG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [682-839] |
1 11 21 31 41 51
| | | | | |
1 QNIEELLTSR SPSKKRKQKD KTDVTTEDAS TNKQDLSHVG KTKRIKSEKT TCEKESSNKK 60
61 PTNEDSGTSM AFLKNSAKRK SPGFLSDKPS FKRQKHHKPN AGNSSGKMFV RDSAGTPFVR 120
121 NSGKQKRSIA ELADLAGKEK LSASEVRKLL KTEMPGKS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
