YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|115441727, gi...
Organism: Oryza sativa Japonica Group
Length: 61 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115441727, gi....

Description E-value Query
Range
Subject
Range
gi|17528968, gi|... - gi|26450708|dbj|BAC42463.1| unknown protein [Arabidopsis thaliana], gi|22330494|ref|NP_683481.1| unk...
95.0 [0..1] [60..1]

Back

Predicted Domain #1
Region A:
Residues: [1-61]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKVATYFAM TFGAFLFWQS MDRVHVWIAL HQDEKKERME REQEIKRMQA ELMAQAKESE  60
   61 S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.691 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.691 a.5.7 4-hydroxy-2-oxovalerate aldolase DmpG, communication domain
View Download 0.641 a.7.17 Description not found.
View Download 0.600 a.7.17 Description not found.
View Download 0.562 a.7.17 Description not found.
View Download 0.544 a.23.5 Hemolysin expression modulating protein HHA
View Download 0.544 a.23.5 Hemolysin expression modulating protein HHA
View Download 0.506 a.5.2 UBA-like
View Download 0.497 a.112.1 Description not found.
View Download 0.487 a.5.1 DNA helicase RuvA subunit, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle