YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|19571025, gi|...
Organism: Oryza sativa Japonica Group
Length: 577 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|19571025, gi|....

Description E-value Query
Range
Subject
Range
gi|84618781, gi|... - gi|84618781|emb|CAJ30500.1| putative laccase [Zea mays], gi|162461426|ref|NP_001105875.1| putative l...
463.0 [0..1] [577..1]

Back

Predicted Domain #1
Region A:
Residues: [1-577]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISYLLRSS ILAVAALLLF SVNLAKGDIR EYQFDVKTTN VTRLCSSKSI VTVNGQFPGP  60
   61 TVFAREGDLV VIRVINHSPY NMSIHWHGIR QLRSGWADGP AYITQCPIQP GGSYVYKYTI 120
  121 TGQRGTLWWH AHISWLRATV YGPIIILPKA GVPYPFPAPD KEVPVVFGEW WKADTEAVIS 180
  181 QATQTGGGPN VSDAFTINGL PGPLYNCSAK DTFKLKVEAG KTYMLRLINA ALNDELFFSI 240
  241 AGHTLTVVDV DAVYVKPFTV DTLLITPGQT TNVLLTTKPS YPGATFYMLA APYSTAMSGT 300
  301 FDNTTVAGIL EYEDPSSHST AAFNKNLPVL RPTLPQINDT SFVSNYTAKL RSFATAEYPA 360
  361 NVPQQVDTRF FFTVGLGTHP CAVNGTCQGP NGSRFAAAVN NVSFVLPSTA LLQSHYTGRS 420
  421 NGVYASNFPA MPLSPFNYTG TPPNNTNVSN GTRLVVLPYG ASVELVMQGT SVLGAESHPF 480
  481 HLHGFNFFVV GQGFGNFDPV NDPAKYNLVD PVERNTVGVP AAGWVAIRFL VDNPGVWFMH 540
  541 CHLEVHVSWG LKMAWVVQDG SLPNQKILPP PSDLPKC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.522879
Match: 2hrgA
Description: No description for 2hrgA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle