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View Structure Prediction Details

Protein: gi|115440837, gi...
Organism: Oryza sativa Japonica Group
Length: 522 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115440837, gi....

Description E-value Query
Range
Subject
Range
gi|26452343 - gi|26452343|dbj|BAC43257.1| unknown protein [Arabidopsis thaliana]
508.0 [0..51] [518..39]

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Predicted Domain #1
Region A:
Residues: [1-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANRRKFSQA GGGGGGGVFD PFGTKQAVSS LRKGGRLPVY VAGVFFVIFV IIMYGEDIRS  60
   61 LTLDPIARAG TTPARIVEPV VTEERHVARV NPPRREVSSA EKAAALPLDV DERPKLATPT 120
  121 PTEAAKEVPK VEKIRKPKKP KTTKKKPRKP RPAKKTVAAA AGGLLGVP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [169-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ETCDLSKGEW VFDNTSYPLY REEQCEFLTS QVTCMRNGRR DDTYQKWRWQ PKDCSMPRFD  60
   61 AKLFMERLRG KRFMFVGDSL NRNQWESMVC LVQSAMSPGK KYVTWEDQRV VFHAVEYNAT 120
  121 VEFYWAPFLV ESNSDDPKIH SIQHRIIKAD AIAAHAQNWR GVDYLVFNTY IWWMNTL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [346-522]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NMKIMRPGGQ SWEEHDEVVR IEAYRKVLTT WASWVNDNID PARTSVFFMS ISPLHISPEV  60
   61 WGNPGGIRCA KETMPLLNWH GPIWLGTDWD MFHAAANVSR TAATRVPITF VDVTTMSERR 120
  121 KDGHTSVHTI RQGKVLTPEQ QADPGTYADC IHWCLPGVPD IWNLILYTRI MSRPQLV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 48.522879
Match: PF03005.6
Description: No description for PF03005.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle