| Protein: | RNC1_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 533 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RNC1_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
336.0 | [0..24] | [533..43] |
|
Region A: Residues: [1-143] |
1 11 21 31 41 51
| | | | | |
1 MAPPAMAFQA LALGPLPLPL PAARRRRRVR VLAVAADHTP PPPPSPSSPP EPANSPSRLL 60
61 RELAERKKAV SPKKKHPPRR FILKPPLDDE RLTQRFLSSP QLSLKALPLL SSCLPSAPLS 120
121 AADRTWMDEY LLEAKQALGY PLA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [144-373] |
1 11 21 31 41 51
| | | | | |
1 PSETLGDGDD DGCPARHFDV LLYLAFQHLD TSCERTRTRH VRSGHSRLWF LGQYVLELAF 60
61 CEFFLQRYPR ESPGPMRERV FALIGKRAIP KWIKAASLHN LVFPYDDLDK MIRKDREPPA 120
121 KAVFWALFGA IYLCFGMPEV YRVLFEAFGM DPEDESCQPK LRRQLEDVDY VSVEFEKRQL 180
181 TWQDVAAYRP PPDALFAHPR LFRACVPPGM HRFRGNIWDF DNRPKVMNTL
|
| Detection Method: | |
| Confidence: | 52.522879 |
| Match: | 2a11A |
| Description: | Crystal Structure of Nuclease Domain of Ribonuclase III from Mycobacterium Tuberculosis |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [374-533] |
1 11 21 31 41 51
| | | | | |
1 GYPLPMNDRI PEITEARNIE LGLGLQLCFL HPSKHKFEHP RFCLERLEYV GQKIQDLVMA 60
61 ERLLMKHLDA PGRWLAEKHR RLLMNKYCGR YLRDKHLHHY IIYGESVQDR FEHNRRLRNP 120
121 STTAVQQAIH GLAYCVYGKP DVRRLMFEVF DFEQVQPKAV
|
| Detection Method: | |
| Confidence: | 5.76 |
| Match: | 1o0wA |
| Description: | RNase III endonuclease catalytic domain; RNase III, C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
