YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|215695266, gi...
Organism: Oryza sativa Japonica Group
Length: 215 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215695266, gi....

Description E-value Query
Range
Subject
Range
gi|109086042 - gi|109086042|ref|XP_001110749.1| PREDICTED: similar to coiled-coil domain containing 25 isoform 1 [M...
257.0 [0..1] [215..195]

Back

Predicted Domain #1
Region A:
Residues: [1-120]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFYYKARPD AGDYTIYMGA DKNENEELIK YGLPEDVWFH VDKVSSAHVY LRLKKGESID  60
   61 SICDGLLEDC AQLVKAHSIQ GNKMNNVEVV YTPWSNLKKS PSMDVGQVGF HNTRMVRVVI 120
  121 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.60206
Match: PF05670.4
Description: No description for PF05670.4 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [121-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VEKRVNEIIN RLNKTRVERR PDLKAEKDAS NAAEKAERKM QLKEKRRREE MERLEKERRA  60
   61 EIRSYKGLMV AEKMTSNRQI ASAGNSMQEM EDDFV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle