| Protein: | Y1235_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 402 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1235_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
209.0 | [0..19] | [400..4] |
|
Region A: Residues: [1-158] |
1 11 21 31 41 51
| | | | | |
1 MPGAGGKKKS PWASGERRPH FFKVLVGDFK QRLKIPPNFC KHIPWEESRK AKGLKEASMA 60
61 ATLEGPSGRT WLVVIRRTAE GTFFTSGWPK FVQDQALREL EFVVFRYDGN TRFTAMVFDR 120
121 TACEREDLMG GGGGDRPRKK RGRPRTAAAS RDAARPKK
|
| Detection Method: |  |
| Confidence: | 17.0 |
| Match: | 1yelA |
| Description: | Structure of the hypothetical Arabidopsis thaliana protein At1g16640.1 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [159-266] |
1 11 21 31 41 51
| | | | | |
1 DSVGKEMVTY RASPSGGQPL QIVDSSWTPE PGSTAVKNEE DADELPVCEL PASSASPPRH 60
61 VPEGALDADG GAARRGAAKT RSLQDDLALA SIPPSIRRYK GYVSRRRA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [267-402] |
1 11 21 31 41 51
| | | | | |
1 VATAERQRAT EIAHAFRSPL PYCVIRMSTM HVYYSFMMRF PTGFSRQHLP RERTDVVLRD 60
61 PGGKVWSVLY IPNTRDRLSR GWCAFARGNC LEEGDYCVFE LVAAAEFRVH IFRVVEPAVP 120
121 AVRLRRVTVT CGRGPT
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 1widA |
| Description: | Solution Structure of the B3 DNA-Binding Domain of RAV1 |
Matching Structure (courtesy of the PDB): |
|
