| Protein: | gi|55620341, gi|... |
| Organism: | Pan troglodytes |
| Length: | 555 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55620341, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..555] | [98..652] |
|
|
0.0 | [1..555] | [23..577] |
|
|
0.0 | [1..555] | [24..578] |
|
|
0.0 | [1..555] | [1..555] |
|
|
0.0 | [1..555] | [1..556] |
|
|
0.0 | [1..555] | [1..555] |
|
Region A: Residues: [1-147] |
1 11 21 31 41 51
| | | | | |
1 MATDMQRKRS SECLDGTLTP SDGQSMERAE SPTPGMAQGM EPGAGQEGAM FVHARSYEDL 60
61 TESEDGAASG DSHKEGTRGP PPLPTDMRQI SQDFSELSTQ LTGVARDLQE EMLPGSSEDW 120
121 LEPPGAVGRP ATEPPREGTT EGDEEDA
|
| Detection Method: |  |
| Confidence: | 4.0 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.865853644587457 | bayes_pls_golite062009 |
| protein binding | 0.256831192363953 | bayes_pls_golite062009 |
|
Region A: Residues: [148-368] |
1 11 21 31 41 51
| | | | | |
1 TEAWRLHQKH VFVLSEAGKP VYSRYGSEEA LSSTMGVMVA LVSFLEADKN AIRSIHADGY 60
61 KVVFVRRSPL VLVAVARTRQ SAQELAQELL YIYYQILSLL TGAQLSHIFQ QKQNYDLRRL 120
121 LSGSERITDN LLQLMARDPS FLMGAARCLP LAAAVRDTVS ASLQQARARS LVFSILLARN 180
181 QLVALVRRKD QFLHPIDLHL LFNLISSSSS FREGEAWTPV C
|
| Detection Method: | |
| Confidence: | 1.11 |
| Match: | 1w63Q |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [369-555] |
1 11 21 31 41 51
| | | | | |
1 LPKFNAAGFF HAHISYLEPD TDLCLLLVST DREDFFAVSD CRRRFQERLR KRGAHLALRE 60
61 ALRTPYYSVA QVGIPDLRHF LYKSKSSGLF TSPEIEAPYT SEEEQERLLG LYQYLHSRAH 120
121 NASRPLKTIY YTGPNENLLA WVTGAFELYM CYSPLGTKAS AVSAIHKLMR WIRKEEDRLF 180
181 ILTPLTY
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
