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View Structure Prediction Details

Protein: SWT6B_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 254 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SWT6B_ORYSJ.

Description E-value Query
Range
Subject
Range
SWT6A_ORYSJ - Bidirectional sugar transporter SWEET6a OS=Oryza sativa subsp. japonica GN=SWEET6A PE=3 SV=1
243.0 [0..1] [235..1]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISPDAARNV VGIIGNVISF GLFLSPVPTF WRICKRKDVE QFKADPYLAT LLNCMLWVFY  60
   61 GIPIVHPNSI LVVTINGIGL IVEGTYLFIF FLYSPNKKRL R

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.408935
Match: PF03083.7
Description: No description for PF03083.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-254]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAVLGVELV FMLAVILGVL LSAHTHKKRS MIVGILCVFF GSIMYFSPLT IMGKVIKTKS  60
   61 VEYMPFFLSL VCFLNGVCWT AYALIRFDIY VTIPNGLGAI FGAIQLILYA CYYRTTPKKT 120
  121 KAAKDVEMPS VISGPGAAAT ASGGSVVSVT VER

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 31.408935
Match: PF03083.7
Description: No description for PF03083.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
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