YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|22830927, gi|...
Organism: Oryza sativa Japonica Group
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|22830927, gi|....

Description E-value Query
Range
Subject
Range
gi|20807808 - gi|20807808|ref|NP_622979.1| Pyrroline-5-carboxylate reductase [Thermoanaerobacter tengcongensis MB4...
gi|20807808, gi|... - gi|20807808|ref|NP_622979.1| pyrroline-5-carboxylate reductase [Thermoanaerobacter tengcongensis MB4...
210.0 [0..19] [281..1]

Back

Predicted Domain #1
Region A:
Residues: [1-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPPQPVPA PAAASPEVFR LGFIGPGNLA ESIARGVAAS GVLPATAIRT APHRRPERAE  60
   61 AFSSIGAHIL ETNAQVVDDS DVIVISVKPQ IVRQVLVELK PLLSEEKLLV SIAAGIKMED 120
  121 LQGWSGHRRF IRVMPNTPSA VGQAASVMCL GEMATENDEN RVRSLFSAIG KVWTAEEKYF 180
  181 DAVTGLSGSG PAYIFLAIEA MADGGVAAGL PRDLALGLAS QTVLGAATMV NKTGKHPGQL 240
  241 KDMVTSPAGT TITGIQELEK GAFRGTLINA VVAATKRCRE LSQS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.522879
Match: 2izzA
Description: No description for 2izzA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle