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View Structure Prediction Details

Protein: TATA_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 170 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TATA_ORYSJ.

Description E-value Query
Range
Subject
Range
TATB_ARATH - Sec-independent protein translocase protein TATB, chloroplastic OS=Arabidopsis thaliana GN=TATB PE=1...
141.0 [0..3] [154..8]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGMAPVATYP SSSSSSTLAR PPCAAAGRAA AAGRARVAAA GMSSRASSFV TGGAGGLAVA  60
   61 VAARTRAGSG AGSRGGGAMG CKC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LFGLGVPELV VIAGVAALVF GPKQLPEIGR SIGKTVKSFQ QAAKEFETEL KKESDDGGDQ  60
   61 PPPPTETAVS DGGEEKELEA SSSKEST

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 18.161151
Match: PF02416.7
Description: No description for PF02416.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle