YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|55613955
Organism:	Pan troglodytes
Length:	419 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55613955.

Description	E-value	Query Range	Subject Range
gi\|112362414 - gi\|112362414\|gb\|AAI20388.1\| HAT1 protein [Bos taurus]	0.0	[1..419]	[1..419]
gi\|74004586 - gi\|74004586\|ref\|XP_850080.1\| PREDICTED: similar to Histone acetyltransferase type B catalytic subuni...	0.0	[1..419]	[1..419]
HAT1_RAT - Histone acetyltransferase type B catalytic subunit OS=Rattus norvegicus GN=Hat1 PE=2 SV=1	0.0	[1..419]	[1..419]
gi\|71297073 - gi\|71297073\|gb\|AAH45673.1\| HAT1 protein [Homo sapiens] gi\|114581757, gi... - gi\|114581759\|ref\|XP_001146383.1\| PREDICTED: similar to histone acetyltransferase 1 isoform 3 [Pan tr...	0.0	[7..419]	[1..413]
HAT1_MOUSE - Histone acetyltransferase type B catalytic subunit OS=Mus musculus GN=Hat1 PE=1 SV=1	0.0	[5..419]	[2..416]
gi\|45383710, gi\|... - gi\|9963998\|gb\|AAG09795.1\|AF257739_1 histone acetyltransferase-1 [Gallus gallus], gi\|45383710\|ref\|NP_...	0.0	[18..418]	[7..407]
gi\|62822182 - gi\|62822182\|gb\|AAY14731.1\| unknown [Homo sapiens]	0.0	[39..419]	[1..381]
gi\|147906079, gi... - gi\|51950016\|gb\|AAH82402.1\| MGC81978 protein [Xenopus laevis], gi\|147906079\|ref\|NP_001087873.1\| MGC81...	0.0	[18..418]	[1..401]
gi\|51858542, gi\|... - gi\|52218998\|ref\|NP_001004572.1\| histone acetyltransferase 1 [Danio rerio], gi\|51858542\|gb\|AAH81671.1...	0.0	[18..418]	[7..407]

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Predicted Domain #1

Region A:
Residues: [1-419]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFGAMEKF LVEYKSAVEK KLAEYKCNTN TAIELKLVRF PEDLENDIRT FFPEYTHQLF  60
   61 GDDETAFGYK GLKILLYYIA GSLSTMFRVE YASKVDENFD CVEADDVEGK IRQIIPPGFC 120
  121 TNTNDFLSLL EKEVDFKPFG TLLHTYSVLS PTGGENFTFQ IYKADMTCRG FREYHERLQT 180
  181 FLMWFIETAS FIDVDDERWH YFLVFEKYNK DGATLFATVG YMTVYNYYVY PDKTRPRVSQ 240
  241 MLILTPFQGQ GHGAQLLETV HRYYTEFPTV LDITAEDPSK SYVKLRDFVL VKLCQDLPCF 300
  301 SREKLMQGFN EDMAIEAQQK FKINKQHARR VYEILRLLVT DMSDAEQYRS YRLDIKRRLI 360
  361 SPYKKKQRDL AKMRKCLRPE ELTNQMNQIE ISMQHEQLEE SFQELVEDYR RVIERLAQE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	144.0
Match:	2p0wA
Description:	No description for 2p0wA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits