YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|50919949, gi|...
Organism: Oryza sativa Japonica Group
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50919949, gi|....

Description E-value Query
Range
Subject
Range
RPA3764 - RPA3764 putative 2Fe:2S ferredoxin 4260666:4261754 reverse MW:39517
146.0 [0..2] [148..214]

Back

Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATCTLATSC VSLSNARTQA SKVAAVKSPA SLSFFSQGMQ FPSLKASSKK LDVSAMATYK  60
   61 VKLITPEGQE HEFEAPDDTY ILDAAETAGV ELPYSCRAGA CSTCAGKIEA GSVDQSDGSF 120
  121 LDDAQQEEGY VLTCVSYPKS DCVIHTHKEG DLY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 30.39794
Match: 1rfkA
Description: Crystal Structure of 2Fe2S Ferredoxin from Thermophilic Cyanobacterium Mastigocladus Laminosus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle