YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|6650389
Organism:	Bacillus firmus
Length:	119 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|6650389.

Description	E-value	Query Range	Subject Range
gi\|22778791, gi\|... - gi\|23100558\|ref\|NP_694025.1\| putative monovalent cation/H+ antiporter subunit G [Oceanobacillus ihey...	140.0	[0..3]	[118..6]
gi\|56909637, gi\|... - gi\|56963394\|ref\|YP_175125.1\| putative monovalent cation/H+ antiporter subunit G [Bacillus clausii KS...	135.0	[0..1]	[116..1]
gi\|119863699, gi... - gi\|119945095\|ref\|YP_942775.1\| monovalent cation/proton antiporter, MnhG/PhaG subunit [Psychromonas i...	129.0	[0..4]	[119..5]
gi\|172057712, gi... - gi\|68054014\|ref\|ZP_00538179.1\| Na+/H+ antiporter subunit [Exiguobacterium sibiricum 255-15], gi\|6800...	128.0	[0..1]	[117..1]
gi\|57159483, gi\|... - gi\|57641159\|ref\|YP_183637.1\| putative monovalent cation/H+ antiporter subunit G [Thermococcus kodaka...	127.0	[0..1]	[118..1]
gi\|68551881, gi\|... - gi\|68551881\|ref\|ZP_00591275.1\| Na+/H+ antiporter subunit [Prosthecochloris aestuarii DSM 271], gi\|68...	127.0	[0..3]	[118..1]
gi\|91796116, gi\|... - gi\|92113026\|ref\|YP_572954.1\| Na+/H+ antiporter subunit [Chromohalobacter salexigens DSM 3043], gi\|91...	127.0	[0..2]	[113..6]
gi\|15613876, gi\|... - gi\|15613876\|ref\|NP_242179.1\| putative monovalent cation/H+ antiporter subunit G [Bacillus halodurans... gi\|25347599 - pir\|\|A83814 Na+/H+ antiporter BH1313 [imported] - Bacillus halodurans (strain C-125)	126.0	[0..1]	[115..1]
gi\|89094147, gi\|... - gi\|89094147\|ref\|ZP_01167090.1\| putative multiple resistance/pH regulation related protein G [Oceanos...	126.0	[0..4]	[118..5]

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Predicted Domain #1

Region A:
Residues: [1-119]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAVEIIISI FVLIGGFLSL LGSIGIIRFP DVYGRLHAAT KSATLGVISI MLATFLFFFL  60
   61 VHGEFVGKLL LTILFVFLTA PVAGMMMGRS AYRVGVPLWE KSTQDDLKKM YEKKMKGSN

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	59.920819
Match:	PF03334.5
Description:	No description for PF03334.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits