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View Structure Prediction Details

Protein: gi|50940043, gi|...
Organism: Oryza sativa Japonica Group
Length: 268 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50940043, gi|....

Description E-value Query
Range
Subject
Range
gi|218192766 - gi|218192766|gb|EEC75193.1| hypothetical protein OsI_11432 [Oryza sativa Indica Group]
gi|108707990, gi... - gi|222624874|gb|EEE59006.1| hypothetical protein OsJ_10726 [Oryza sativa Japonica Group], gi|2157068...
354.0 [0..1] [268..1]

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Predicted Domain #1
Region A:
Residues: [1-110]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADEEHAEKR EEVSELTPFD PTKKKKKKKV VIQDPSDEVD KLAEKTENLT VTEPGELNFT  60
   61 GMKKKKKKPV DLDLSINDIG DGEDILDDQV VEEEEGEGIV LGGAPRYPWE 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [111-268]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTDRDYNYDE LLGRVFNILR ENNPDLAGDR RRTVMRPPQV LREGTKKTVF VNFMDLCKTM  60
   61 HRQPEHVMMF LLAEMGTSGS LDGQQRLVIK GRFAPKNFEA ILRRYINEYV ICNGCKSPDT 120
  121 ILSKENRLFF LRCEQCGSSR SVAPIKAGFV AQVGRRKA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.30103
Match: 2d74B
Description: No description for 2d74B was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle