| Protein: | gi|125601205, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 585 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|125601205, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
912.0 | [0..39] | [585..16] |
|
|
867.0 | [0..38] | [583..17] |
|
|
786.0 | [0..43] | [583..28] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MSSSDQDDHD EDAPLFRASS GDDDDHPHPR RRSSPVGEVP VAQSIIKAAS NVCFSLFVLA 60
61 VLVVTVVAVT YQPPDPWLQS SAAITTSLSR VLPNSTFLLP DDSLLPTGED FNSSSSTPSA 120
121 PRRDDPDQAT ATATAAAVNG TCDP
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.569 | c.47.1 | Thioredoxin-like |
| View | Download | 0.569 | c.47.1 | Thioredoxin-like |
| View | Download | 0.454 | d.106.1 | Sterol carrier protein, SCP |
| View | Download | 0.390 | a.4.1 | Homeodomain-like |
| View | Download | 0.390 | a.4.1 | Homeodomain-like |
| View | Download | 0.340 | d.50.3 | PI-Pfui intein middle domain |
| View | Download | 0.337 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.301 | a.130.1 | Chorismate mutase II |
| View | Download | 0.271 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.266 | d.58.7 | RNA-binding domain, RBD |
|
Region A: Residues: [145-309] |
1 11 21 31 41 51
| | | | | |
1 DAPLNCSDPR VLAAVKAFNA KAFFRKSIVF LSYEAPVPGP KPGECDVAWR FRNRREKSWR 60
61 RYRDYRRFVL VPGDGCALDI NRVGKFRSGT NAARPPRQKG SKNRNPRVAP PPVDAEINDT 120
121 IPIVGSEAEF RRGKYLYYMR GGDHCKSMNQ FIWSFLCGLG EAKFL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [310-457] |
1 11 21 31 41 51
| | | | | |
1 NRTFVMDLNM CLSGAHTNNG KDEDGKDFRY YFDFEHLKES VSVVEEGDFL KDWKRWDKKK 60
61 GPGRISVRKV PSYKVTPMQL KRDKSNIIWR LFDGQEPENY WYRVCEGRAA KVIQRPWYAI 120
121 WKSKRLMNIV TEIAGRMDWD YDGLHVIR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.388 | a.1.1 | Globin-like |
| View | Download | 0.368 | d.110.4 | SNARE-like |
| View | Download | 0.343 | d.110.4 | SNARE-like |
|
Region A: Residues: [458-585] |
1 11 21 31 41 51
| | | | | |
1 GWKAQNKQMY PNLDADTSPE ALVDKVPKLI KQPMRNLYIA TNEPFYNYFD KLRSYFHVHL 60
61 LDDYKELWSN TSEWYNETTT LSGGRPVPFD AYMRVIVDTE VFYRAKTQVE TFNNLTRDCK 120
121 DGINTCNL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.750 | a.24.19 | Description not found. |
| View | Download | 0.747 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.747 | c.13.2 | Anti-sigma factor antagonist SpoIIaa |
| View | Download | 0.707 | c.10.1 | RNI-like |
| View | Download | 0.707 | c.10.1 | RNI-like |
| View | Download | 0.629 | a.24.18 | Description not found. |
| View | Download | 0.552 | c.114.1 | YchN-like |
| View | Download | 0.552 | c.114.1 | YchN-like |
| View | Download | 0.546 | c.20.1 | Initiation factor IF2/eIF5b, domain 3 |
| View | Download | 0.520 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
