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View Structure Prediction Details

Protein: gi|215694908, gi...
Organism: Oryza sativa Japonica Group
Length: 301 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215694908, gi....

Description E-value Query
Range
Subject
Range
gi|92871384 - gi|92871384|gb|ABE80372.1| Protein of unknown function DUF298 [Medicago truncatula]
292.0 [0..9] [296..14]

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Predicted Domain #1
Region A:
Residues: [1-189]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWPTGCLGF EAAAAVCPAA FQAYQKYYDI VSAFSNVNTR EGLAELSQVI DGMEGLRDAI  60
   61 FSDIPKLMSA LDLDDAHRFS IFYDFVFFIS RENGQKNISV QRAVGAWRMV LNGRFWLLDR 120
  121 WCNFVEKYQR YNITEDVWQQ LLAFSRCVNE DLEGYDPKGA WPVLVDDFVE HMHRIYNSCD 180
  181 CSSAMESQL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.522879
Match: 2is9A
Description: No description for 2is9A was found.

Predicted Domain #2
Region A:
Residues: [190-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NISNTFGGIN PLPGSKRKCP TRLKPNEDVD LSDNFTRSVH LAPLKRLKES PVITKYGVWE  60
   61 YNAGTPLVHS PSDYCDDANL HNPRGCLQNS PSIVEDCLSK GFEGCISMKC SF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle