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View Structure Prediction Details

Protein: gi|50939293, gi|...
Organism: Oryza sativa Japonica Group
Length: 532 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50939293, gi|....

Description E-value Query
Range
Subject
Range
gi|55793070 - gi|55793070|gb|AAV65581.1| folic acid synthesis protein [synthetic construct]
537.0 [0..3] [530..224]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRAKETFRK MYSVAKNYCG GGLAASDALS VSALGRSLKP SRKASRHVVP CRARSFTQCS  60
   61 LGGGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 53.522879
Match: 2cg8A
Description: No description for 2cg8A was found.

Predicted Domain #2
Region A:
Residues: [66-532]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ADQEIVIALG SNVGDRISTF DRALRMMKNS GVNITRHACL YETSPAYVTD QPRFLNSAVR  60
   61 GTTKLEPHEL LKKLKEIEKD IGRTDGIRYG PRPIDLDILL YGKSHISTEN LTVPHERIHE 120
  121 RPFVLAPLVD LLGSSTDDNV EKSWHSLAKC TGGFFESWDK LGGESIIGTE GIKRVLPVGN 180
  181 RLLDWSERTL VMGVLNLTPD SFSDGGKFQE VEAAIAQTKL LISEGADIID IGAQSTRPLA 240
  241 RRLSADEELE RLVPVLDAIT GIPEMEGKLL SVDTFYAEVA AEAVKRGVHI VNDVSGGQID 300
  301 PRILEVVAEL GVPYVTMHMR GDPSTMQSEQ NLLYGDVCKE VASELYKRVR QAELSGIPLW 360
  361 RIVLDPGIGF SKNSKHNLEV IMGLESIRTE IGKMSLGASH VPILLGPSRK RFLGEICNRV 420
  421 NPTERDAATM VVATAGILNG ANIVRVHNVK YGVDTAKVSD ALSKGRR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 108.0
Match: 2bmbA
Description: X-ray structure of the bifunctional 6-hydroxymethyl-7,8- dihydroxypterin pyrophosphokinase dihydropteroate synthase from Sacchromyces cerevisiae
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle