YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|215678915, gi...
Organism: Oryza sativa Japonica Group
Length: 263 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215678915, gi....

Description E-value Query
Range
Subject
Range
CB2G_SOLLC - Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1
271.0 [0..1] [262..1]

Back

Predicted Domain #1
Region A:
Residues: [1-69]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALVSASSST TAVAALPGAA RASSFLGGAG RSGRLLLRQA ESSSARASFA VRAAAPDRPI  60
   61 WFPGSTPPP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [70-263]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WLDGSLPGDF GFDPLGLGSD PESLRWNVQA ELVHCRWAML GAAGIFIPEF LTKIGILNTP  60
   61 SWYTAGEQQY FTDTTTLFII ELILIGWAEG RRWADIIKPG CVNTDPIFPN NKLTGTDVGY 120
  121 PGGLWFDPLG WGTGSPEKIK ELRTKEIKNG RLAMLAVMGA WFQAEYTGTG PIDNLFAHLA 180
  181 DPGHATIFQA FTPK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 59.69897
Match: 2o012
Description: No description for 2o012 was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle