YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|34393255, gi|...
Organism: Oryza sativa Japonica Group
Length: 351 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34393255, gi|....

Description E-value Query
Range
Subject
Range
gi|115472621, gi... - gi|50938179|ref|XP_478617.1| putative strictosidine synthase [Oryza sativa (japonica cultivar-group)...
230.0 [0..1] [339..1]

Back

Predicted Domain #1
Region A:
Residues: [1-351]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAVLGTGRV GTLTRVALTI VVFLLLLPSH ALAAAVAKDT SATLVETLPL PTTLVGPESV  60
   61 AFDKFGDGPY SGVSDGRILR WDGADEGWTT YSHSPGYNVA KCMAPKLHPA ELTESKCGRP 120
  121 LGLRFHNTSG NLYIADAYKG LMRVGPRGGE ATVLATEADG VPFKFTNGVD VNQVTGEVYF 180
  181 TDSSTRFQRS QHEMVTATGD STGRLMKYDA TTGYLDVLQS GMTYPNGLAL SADRSHLVVA 240
  241 LTGPCKLVRH WIDGPKAGTS EPFAELPGYP DNVRPDGKGG YWVALHREKT ESPYGSDTHL 300
  301 LAVRIGRKGK ILQELRGPKN VRPTEVIERG GGKLYLGSVV WRLWVPHTHT A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 32.30103
Match: 2fpbA
Description: No description for 2fpbA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle