| Protein: | gi|113611436, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 663 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113611436, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
482.0 | [0..23] | [626..28] |
|
Region A: Residues: [1-203] |
1 11 21 31 41 51
| | | | | |
1 MRRRSTFAVL LFAAAALPLA AGQPWQLCGR RGGGGGGTYT ANSTYDTNLQ SLIAALQQNA 60
61 STSPTLFAAG ALGAAPDAVY GLILCRGDVS SSDCYDCGTR AGQDVAPACN RTRDAILVYN 120
121 QCYTRFSAAG DFLASANNSG QAPLMNSDNV TTADVAGYDR AVTELLSATL MYAVVNTTRL 180
181 FATGQRVGAD PGFPNIYSAA QCT
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [204-317] |
1 11 21 31 41 51
| | | | | |
1 PDLSPALCRS CLEDLVARWW KTFPRTTVGA RIVGTRCSLR SEVSQDKFYT GAPMLKLWAD 60
61 GLSPAAAAAS PDAAPGTTGV KNNSANKILE IVLPIVAVAI VAAVSILLWN IRKK
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | PF01657.8 |
| Description: | No description for PF01657.8 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [318-663] |
1 11 21 31 41 51
| | | | | |
1 RRRGKAEHFT GPDAAEDFES VKSTLLSLAS LQVATDNFNE SMKLGEGGFG AVYKGLLFRQ 60
61 DVAVKRLAKG SNQGLEEVKN ELVLVAKLHH KNLVQLVGFC LEEGERMLVY EYMPNKSLDT 120
121 FLFDEEKRRQ LDWTTRFRII EGIARGLQYL HQDSQKKIVH RDMKASNILL DADMNPKIGD 180
181 FGLARLFGQD QTREITNRIV GTFGYMSPEY VTHGQYSTKS DVFSFGILVI EIVTGRRRNN 240
241 GPYFFEPNED IISIVWRHWA EGNIKEIIDH SLGRNYPEGE VLKCVNIGLL CVQQNPIDRP 300
301 TMADVMVLLN SDATSTLPAP VVHIPVASFS DGSSGYSQTV TQLSPR
|
| Detection Method: | |
| Confidence: | 65.69897 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
