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View Structure Prediction Details

Protein: gi|27261033, gi|...
Organism: Oryza sativa Japonica Group
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|27261033, gi|....

Description E-value Query
Range
Subject
Range
PDRP1_ORYSJ - Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Oryza sativa subsp. japon...
PDRP1_ORYSI - Probable pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Oryza sativa subsp. indic...
409.0 [0..35] [443..35]
PDRP1_ARATH - Pyruvate, phosphate dikinase regulatory protein 1, chloroplastic OS=Arabidopsis thaliana GN=RP1 PE=1...
384.0 [0..26] [444..1]
PDRP1_MAIZE - Pyruvate, phosphate dikinase regulatory protein, chloroplastic OS=Zea mays GN=PDRP1 PE=1 SV=1
377.0 [0..18] [444..7]
PDRP_GEOSL - Putative pyruvate, phosphate dikinase regulatory protein OS=Geobacter sulfurreducens (strain ATCC 51...
Y450_GEOSL - Putative phosphotransferase GSU0450 OS=Geobacter sulfurreducens GN=GSU0450 PE=3 SV=1
355.0 [0..151] [428..1]
PDRP_GEOMG - Putative pyruvate, phosphate dikinase regulatory protein OS=Geobacter metallireducens (strain GS-15 ...
351.0 [0..151] [428..1]
gi|110600815, gi... - gi|110600815|ref|ZP_01389026.1| Protein of unknown function DUF299 [Geobacter sp. FRC-32], gi|110548...
351.0 [0..143] [428..7]
PDRP_ALKOO - Putative pyruvate, phosphate dikinase regulatory protein OS=Alkaliphilus oremlandii (strain OhILAs) ...
351.0 [0..151] [434..1]
PDRP_RHOP2 - Putative pyruvate, phosphate dikinase regulatory protein OS=Rhodopseudomonas palustris (strain HaA2)...
348.0 [0..151] [435..3]
gi|221314770 - gi|221314770|ref|ZP_03596575.1| hypothetical protein BsubsN3_13717 [Bacillus subtilis subsp. subtili...
gi|221319693 - gi|221319693|ref|ZP_03600987.1| hypothetical protein BsubsJ_13638 [Bacillus subtilis subsp. subtilis...
gi|221323970 - gi|221323970|ref|ZP_03605264.1| hypothetical protein BsubsS_13772 [Bacillus subtilis subsp. subtilis...
YQFL_BACSU - Putative phosphotransferase yqfL OS=Bacillus subtilis GN=yqfL PE=1 SV=1
PDRP_BACSU - Putative pyruvate, phosphate dikinase regulatory protein OS=Bacillus subtilis (strain 168) GN=yqfL P...
346.0 [0..153] [431..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSSSTSPR FGSMISAKLA SPPPSLLLPP SPRLQGRRLT PPSCTPGTPA ALPSPGPDKE  60
   61 PEREAAGSGS GSATTPRSPA QLGSSQLHRW SRARAHRSGR RLEWPTIRDR GSGGASSPPT 120
  121 PTRPHPSSDE AASAAAKVAV EEEDGYGVVG RDEAAKSIYM VS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGTGWTAEHS VNAALGQFEH CLVDRGCAVN THLFNGIDDM DRLIEIVKQA AKEGALVLYT  60
   61 LADPSMAEAT KKACELWGVP SNDILRPTIE AIASHIGVAP SGIPRSSPSR KGQLTEDYFR 120
  121 RIEAIDFTIK 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 14.107905
Match: PF03618.5
Description: No description for PF03618.5 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.891 N/A N/A c.57.1 Molybdenum cofactor biosynthesis proteins
View Download 0.881 N/A N/A c.46.1 Rhodanese/Cell cycle control phosphatase
View Download 0.754 N/A N/A c.23.1 CheY-like
View Download 0.738 N/A N/A c.48.1 TK C-terminal domain-like
View Download 0.726 N/A N/A c.48.1 TK C-terminal domain-like
View Download 0.723 N/A N/A c.48.1 TK C-terminal domain-like
View Download 0.666 N/A N/A c.16.1 Lumazine synthase
View Download 0.651 N/A N/A c.57.1 Molybdenum cofactor biosynthesis proteins
View Download 0.612 N/A N/A c.23.13 Type II 3-dehydroquinate dehydratase
View Download 0.606 N/A N/A c.3.1 FAD/NAD(P)-binding domain

Predicted Domain #3
Region A:
Residues: [293-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDDGAQPQNL NRAHIVLVGV SRTGKTPLSI YLAQKGYKVA NVPIVMGVNL PKSLFEIDQD  60
   61 KIFGLTINPV VLQAIRKARA KTLGFHGQKS NYAEMEHVRG ELDHANQIFA QHPIWPVIEV 120
  121 TGKAIEETAA VVVRIFHDRK QKCAMPRISK RY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.958
Match: 2iyqA
Description: No description for 2iyqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle