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View Structure Prediction Details

Protein: gi|33354212, gi|...
Organism: Oryza sativa Japonica Group
Length: 541 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33354212, gi|....

Description E-value Query
Range
Subject
Range
gi|50904649, gi|... - gi|50904649|ref|XP_463813.1| putative dihydrolipoamide S-acetyltransferase [Oryza sativa (japonica c...
504.0 [0..1] [541..1]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSAAHLLRHS RKLRSLHNAL DCERSGLVRY FSTASGSFPT KGNGAEKRIG GARFPQRKQP  60
   61 GKELETSKLS LGLNGSYTCR RSPNNFIPNT ITGLNGSLSC GQIASARSFS SSADL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.69897
Match: 2qf7A
Description: No description for 2qf7A was found.

Predicted Domain #2
Region A:
Residues: [116-297]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPHQEIGMPS LSPTMTEGNI ARWLKKEGDK VSPGEVLCEV ETDKATVEME CMEEGYLAKI  60
   61 IHGDGSKEIK VGEIIAVTVE EEGDIKKFKD YKPSTLAAPV APSELKAQSE PTEPKVEERE 120
  121 PSKASELKAP RTEEPSRSGD RIFSSPLARK LAEDNNVPLS SVKGTGPDGR ILKADIEDYL 180
  181 AK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.0
Match: 1zy8K
Description: The crystal structure of dihydrolipoamide dehydrogenase and dihydrolipoamide dehydrogenase-binding protein (didomain) subcomplex of human pyruvate dehydrogenase complex.
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [298-541]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GCRKEALAAP GLSYTDVPNA QIRKVTANRL LSSKQTIPHY YLTVDTRVDN LIKLRGELNP  60
   61 LQESSGGKKI SINDLVIKAA ALALRKVPQC NSSWMNDFIR QYHNVNINVA VQTEHGLFVP 120
  121 VIRDADKKGL GMIAEEVKQL AQRARDNSLK PDDYEGGTFT ISNLGGPFGI KQFCAIINPP 180
  181 QSAILAIGSA ERRVIPGSAN GQYEFGSFMS ATMSCDHRVI DGAIGAEFLK AFKGYIENPT 240
  241 SMLL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 87.09691
Match: 1c4tA
Description: Dihydrolipoamide succinyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.51562638409295 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle