| Protein: | gi|34901854, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 1274 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for gi|34901854, gi|....
|
Region A: Residues: [1-115] |
1 11 21 31 41 51
| | | | | |
1 MARRRFFPAW VVVVMVVVVV LGSCSAAAAA GDGDALMDVK NAFVEDPGGV LAGWGGGGGN 60
61 SSAFCSWAGV ECDAAGARVT GLNLSGAGLA GEVPGAALAR LDRLEVVDLS SNRLA
|
| Detection Method: |  |
| Confidence: | 43.0 |
| Match: | 2z82A |
| Description: | No description for 2z82A was found. |
|
Region A: Residues: [116-757] |
1 11 21 31 41 51
| | | | | |
1 GPVPAALGAL GRLTALLLYS NRLAGELPPS LGALAALRVL RVGDNPALSG PIPAALGVLA 60
61 NLTVLAAASC NLTGAIPRSL GRLAALTALN LQENSLSGPI PPELGGIAGL EVLSLADNQL 120
121 TGVIPPELGR LAALQKLNLA NNTLEGAVPP ELGKLGELAY LNLMNNRLSG RVPRELAALS 180
181 RARTIDLSGN LLTGELPAEV GQLPELSFLA LSGNHLTGRI PGDLCGGGGG GAESTSLEHL 240
241 MLSTNNFSGE IPGGLSRCRA LTQLDLANNS LTGVIPAALG ELGNLTDLLL NNNTLSGELP 300
301 PELFNLTELK VLALYHNGLT GRLPDAVGRL VNLEVLFLYE NDFSGEIPET IGECSSLQMV 360
361 DFFGNRFNGS LPASIGKLSE LAFLHLRQNE LSGRIPPELG DCVNLAVLDL ADNALSGEIP 420
421 ATFGRLRSLE QLMLYNNSLA GDVPDGMFEC RNITRVNIAH NRLAGGLLPL CGSARLLSFD 480
481 ATNNSFSGGI PAQLGRSRSL QRVRFGSNAL SGPIPAALGN AAALTMLDAS GNALTGGIPD 540
541 ALARCARLSH IALSGNRLSG PVPAWVGALP ELGELALSGN ELTGPVPVQL SNCSKLIKLS 600
601 LDGNQINGTV PSEIGSLVSL NVLNLAGNQL SGEIPATLAK LI
|
| Detection Method: | |
| Confidence: | 71.69897 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [758-933] |
1 11 21 31 41 51
| | | | | |
1 NLYELNLSRN LLSGPIPPDI GQLQELQSLL DLSSNDLSGS IPASLGSLSK LESLNLSHNA 60
61 LAGAVPPQLA GMSSLVQLDL SSNQLQGRLG SEFSRWPRGA FAGNARLCGH PLVSCGVGGG 120
121 GRSALRSATI ALVSAAVTLS VVLLVIVLVL IAVRRRRSGE VNCTAFSSSL GGGGNN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [934-1274] |
1 11 21 31 41 51
| | | | | |
1 TNGRQLVVKG SARREFRWEA IMEATANLSD QFAIGSGGSG TVYRAELPTG ETVAVKRIAH 60
61 MDSDMLLHDK SFAREVKILG RVRHRHLVKL LGFVASHDVG GGGGGGGSML VYEYMENGSL 120
121 YDWLHGIAAG GGGGGDGERK KRVLSWDARL KVAAGLAQGV EYLHHDCVPR VVHRDIKSSN 180
181 VLLDGDMEAH LGDFGLAKSV ADNRKDFTDS ASCFAGSYGY MAPECGYSLK TTEKSDVYSM 240
241 GIVMMELVTG LTPTDKAFGG DVDMVRWVQS RVEAPSPGRE QVFDPALKPL APREESSMTE 300
301 VLEVALRCTR TAPGERPTAR QVSDLLLHVS LDYYRAGEHK R
|
| Detection Method: | |
| Confidence: | 45.0 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
