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View Structure Prediction Details

Protein: gi|113611118, gi...
Organism: Oryza sativa Japonica Group
Length: 142 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|113611118, gi....

Description E-value Query
Range
Subject
Range
gi|71020411, gi|... - gi|71020411|ref|XP_760436.1| hypothetical protein UM04289.1 [Ustilago maydis 521], ref|XP_401904.1| ...
174.0 [0..1] [134..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEDDYNDMD MGYEDEPPEP EIEEGAEEEP ENNNEDAVDD VVGAEDDKEQ EKTARPRKTS  60
   61 KYMTKYERAR ILGTRALQIS MNAPVMVELE GETDPLEIAM KELRARKIPF TIRRYLPDGS 120
  121 YEDWGVDELI VEDSWKRQVG GG

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Detection Method: PSI-BLAST
Confidence: 39.221849
Match: 1i3qF
Description: RPB6
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.372436499192166 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle