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View Structure Prediction Details

Protein: gi|51963372, gi|...
Organism: Oryza sativa Japonica Group
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|51963372, gi|....

Description E-value Query
Range
Subject
Range
gi|73946623 - gi|73946623|ref|XP_859981.1| PREDICTED: similar to SWI/SNF-related matrix-associated actin-dependent...
150.0 [0..6] [397..92]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGTPASSPL FGTPSTTPAF GAPSSTPAFG TPSTNPAFGT PSSTPAFGAP SSTPSFGTPS  60
   61 TAPAFGTPSS TPAFGAPSST PAFGAPFSTP AFGVAPSPSP SPFGFQQQMT PSPSPFGFAG 120
  121 GGGGQITTQM APVAPLPLSP SDRDIQAIVD AYKEDPGNPR YAFRHLLFSV TEPSQR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.154902
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #2
Region A:
Residues: [177-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKPVAASDIM WAEAMGKLEG MDSSDRERLW PQLVQGFKDL SYRLKLQDGV LVSDSDRLSM  60
   61 TRDNVKKLQR HFQADTYPWI QRLKQQELVI ERRLLRIMRI VEALENRGYR IPLTKEEADL 120
  121 YERLAVIAKQ LKGPTGDLHR RVYNLLSTSR LLASAGGTAG PIYIPSSAKV DEQSVAELLE 180
  181 ALQQQTEAVA KLGNVMKRDT RDLEIILSED TDMAEDSVGR RALKMYN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.69897
Match: 2dfsA
Description: No description for 2dfsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle