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View Structure Prediction Details

Protein: gi|2293566
Organism: Oryza sativa
Length: 181 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|2293566.

Description E-value Query
Range
Subject
Range
gi|34909214, gi|... - gi|34909214|ref|NP_915954.1| putative ADP-ribosylation factor [Oryza sativa (japonica cultivar-group...
195.0 [0..1] [180..179]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLAFGKLFS RLFAKKEMRI LMVGLDAAGK TTILYKLKLG EIVTTIPTIG FNVETVEYKN  60
   61 ISFTVWDVGG QDKIRPLWRH YFQNTQGLIF VVDSNDRDRV VEARDELHRM LNEDELRDAV 120
  121 LLVFANKQDL PNAMNAAEIT DKLGLHSLRQ RHWYIQSTCA TTGEGLYEGL DWLSSNIASK 180
  181 A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1r8qA
Description: FULL-LENGTH ARF1-GDP-MG IN COMPLEX WITH BREFELDIN A AND A SEC7 DOMAIN
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle