| Protein: | CFM2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1011 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CFM2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
1238.0 | [0..1] | [1011..1] |
|
Region A: Residues: [1-163] |
1 11 21 31 41 51
| | | | | |
1 MLLPLFHQQP LILAKTFPDR IFPPFLVPNT LVSRRNVSRA NSGIFCSSAS GRKTLPQSAI 60
61 QRIAEKLRSL GFVEEKHDSP TRRITGEESG KNSPGEIFVP LPKQLPIHRV GHTIDTSWST 120
121 PSYPVPKPGS GTAISRYHEL KRVWKKETEM ERKKEEKVPS LAE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [164-262] |
1 11 21 31 41 51
| | | | | |
1 LTLPPAELRR LRTVGIRLTK KLKIGKAGIT EGIVNGIHER WRTTEVVKIF CEDISRMNMK 60
61 RTHDVLETKT GGLVIWRSGS KILLYRGVNY QYPYFVSDR
|
| Detection Method: | |
| Confidence: | 3.62 |
| Match: | 1ln4A |
| Description: | hypothetical protein YhbY |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [263-495] |
1 11 21 31 41 51
| | | | | |
1 DLAHEAASGA SSMDQGVVDS REKQSIAESS APSITNKMVK PMLTQGVGSP DKVRFQLPGE 60
61 VQLVEEADRL LEGLGPRFTD WWAYDPLPVD GDLLPAVVPD YRRPFRLLPY GVSPKLTDDE 120
121 MTTIRRLGRP LPCHFALGRN RNLQGLAVAI VKLWEKCELA KIAVKRGVQN TNSELMAEEL 180
181 KWLTGGTLIS RDKDFIVLYR GKDFLPSAVS SAIEERRRQT MIMENSSVHG NKL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [496-568] |
1 11 21 31 41 51
| | | | | |
1 TENEEEIKPR AVKEDIELEA KDQKDHIQTH QMKSRQRNSP EAILEKTSMK LSMALEKKAN 60
61 AEKVLADLEN RES
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [569-679] |
1 11 21 31 41 51
| | | | | |
1 PQLSDIDKEG ITNDEKYMLR KIGLKMKPFL LLGRRGVFDG TIENMHLHWK YRELVKIICN 60
61 EYSIEAAHKV AEILEAESGG ILVAVEMVSK GYAIIVYRGK NYERPQCLRP Q
|
| Detection Method: | |
| Confidence: | 28.154902 |
| Match: | 1jo0A |
| Description: | YhbY homologue HI1333 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [680-867] |
1 11 21 31 41 51
| | | | | |
1 TLLSKREALK RSVEAQRRKS LKLHVLKLSN NIEELNRQLV EDSATNETWS DGESSNMMVE 60
61 EETENQHTEP EKAREKIELG YSSDLSVPSS GEENWEDDSE GEVDPLTTSS QEYQEDESES 120
121 ASSQRHEGNS LDSTANLSVF AETGSANASS FHDRSLPHNS FLNANRKLPG SSTGSGSQIS 180
181 ALRERKSE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [868-1011] |
1 11 21 31 41 51
| | | | | |
1 NDGLVTDLSN RERLILRKQA LKMKKRPPFA VGRSNVVTGL ARTLKMHFQK NPLAIVNVKG 60
61 RANGTSVQEV IAKLKEETGA LLVSQEPSKV ILYRGWGAEE EMKSFYPNNN VKSSINLPST 120
121 RSFVDDPPHV SPALIEAIRL ECGL
|
| Detection Method: | |
| Confidence: | 2.27 |
| Match: | 1rq8A |
| Description: | Solution structure of the hypothetical protein SAV1595 from Staphylococcus aureus, a putative RNA binding protein |
Matching Structure (courtesy of the PDB): |
|
