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View Structure Prediction Details

Protein: gi|215769107, gi...
Organism: Oryza sativa Japonica Group
Length: 1109 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|215769107, gi....

Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASVARVLL AAAVFFAAVA AAAAASSSAA AVAALMEFKT KLDDVDGRLS SWDAAGGSGG  60
   61 GDPCGWP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [68-192]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GIACSAAMEV TAVTLHGLNL HGELSAAVCA LPRLAVLNVS KNALAGALPP GLAACRALEV  60
   61 LDLSTNSLHG GIPPSLCSLP SLRQLFLSEN FLSGEIPAAI GNLTALEELE IYSNNLTGGI 120
  121 PTTIA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.045757
Match: 2id5A
Description: No description for 2id5A was found.

Predicted Domain #3
Region A:
Residues: [193-588]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALQRLRIIRA GLNDLSGPIP VEISACASLA VLGLAQNNLA GELPGELSRL KNLTTLILWQ  60
   61 NALSGEIPPE LGDIPSLEML ALNDNAFTGG VPRELGALPS LAKLYIYRNQ LDGTIPRELG 120
  121 DLQSAVEIDL SENKLTGVIP GELGRIPTLR LLYLFENRLQ GSIPPELGEL TVIRRIDLSI 180
  181 NNLTGTIPME FQNLTDLEYL QLFDNQIHGV IPPMLGAGSN LSVLDLSDNR LTGSIPPHLC 240
  241 KFQKLIFLSL GSNRLIGNIP PGVKACRTLT QLQLGGNMLT GSLPVELSLL RNLSSLDMNR 300
  301 NRFSGPIPPE IGKFRSIERL ILSENYFVGQ IPPGIGNLTK LVAFNISSNQ LTGPIPRELA 360
  361 RCTKLQRLDL SKNSLTGVIP QELGTLVNLE QLKLSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.39794
Match: 1dfjI
Description: Ribonuclease inhibitor
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [589-792]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSLNGTVPSS FGGLSRLTEL QMGGNRLSGQ LPVELGQLTA LQIALNVSYN MLSGEIPTQL  60
   61 GNLHMLEFLY LNNNELEGEV PSSFGELSSL LECNLSYNNL AGPLPSTTLF QHMDSSNFLG 120
  121 NNGLCGIKGK SCSGLSGSAY ASREAAVQKK RLLREKIISI SSIVIAFVSL VLIAVVCWSL 180
  181 KSKIPDLVSN EERKTGFSGP HYFL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [793-1109]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KERITFQELM KVTDSFSESA VIGRGACGTV YKAIMPDGRR VAVKKLKCQG EGSNVDRSFR  60
   61 AEITTLGNVR HRNIVKLYGF CSNQDCNLIL YEYMANGSLG ELLHGSKDVC LLDWDTRYRI 120
  121 ALGAAEGLRY LHSDCKPKVI HRDIKSNNIL LDEMMEAHVG DFGLAKLIDI SNSRTMSAIA 180
  181 GSYGYIAPEY AFTMKVTEKC DIYSFGVVLL ELVTGQSPIQ PLEQGGDLVN LVRRMTNSST 240
  241 TNSEIFDSRL NLNSRRVLEE ISLVLKIALF CTSESPLDRP SMREVISMLM DARASAYDSF 300
  301 SSPASEAPIE DDSSLKH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.69897
Match: 2qkwB
Description: No description for 2qkwB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle