| Protein: | paaD |
| Organism: | Rhodopseudomonas palustris CGA009 |
| Length: | 167 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for paaD.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..1] | [167..1] |
|
Region A: Residues: [1-108] |
1 11 21 31 41 51
| | | | | |
1 MVTLTGSDAE LRQRAWDAAA TVCDPEIPVL TIADLGVLRE VRVEHGRVEV AITPTYSGCP 60
61 AMNMIALEIE TALARAGIAQ ARVTTVLAPA WTTDWMSEAG RAKLKDYG
|
| Detection Method: |  |
| Confidence: | 30.69897 |
| Match: | 1uwdA |
| Description: | Conserved Hypothetical Protein TM0487 from Thermotoga maritima |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0204692195967625 | bayes_pls_golite062009 |
|
Region A: Residues: [109-167] |
1 11 21 31 41 51
| | | | | |
1 IAPPQATGSR RALFGTLEIA CPQCGSTDTE QLSEFGSTSC KALWRCKSCR EPFDYFKCH
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.282 | N/A | N/A | a.164.1 | C-terminal domain of DFF45/ICAD (DFF-C domain) |
| View | Download | 0.245 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
| View | Download | 0.200 | N/A | N/A | a.140.1 | LEM domain |
