YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FENR3_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 378 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FENR3_ORYSJ.

Description E-value Query
Range
Subject
Range
FENR2_ORYSA, FEN... - (P41345) Ferredoxin--NADP reductase, root isozyme, chloroplast precursor (EC 1.18.1.2) (FNR), Ferred...
FENR2_ORYSJ - Ferredoxin--NADP reductase, root isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os03g0784...
gi|125545944 - gi|125545944|gb|EAY92083.1| hypothetical protein OsI_13788 [Oryza sativa Indica Group]
300.0 [0..1] [378..1]

Back

Predicted Domain #1
Region A:
Residues: [1-76]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASALGAQAS VAAPIGAGGY GRSSSSKGSN TVNFCNKSWI GTTLAWESKA LKSRHMNKIF  60
   61 SMSVQQASKS KVAVKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.221849
Match: 1jq4A
Description: Methane monooxygenase reductase N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [77-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LELDNAKEPP LNLYKPKEPY TATIVSVERL VGPKAPGETC HIVIDHGGNV PYWEGQSYGV  60
   61 IPPGENPKKP GSPNTVRLYS IASTRYGDSF DGKTASLCVR RAVYYDPETG KEDPTKKGIC 120
  121 SNFLCDSKPG DKVQITGPSG KIMLLPEDDP NATHIMIATG TGVAPYRGYL RRMFMEDVPS 180
  181 FKFGGLAWLF LGVANTDSLL YDEEFTNYLQ QYPDNFRYDK ALSREQKNKN GGKMYVQDKI 240
  241 EEYSDEIFKL LDGGAHIYFC GLKGMMPGIQ DTLKRVAEQR GESWEQKLSQ LKKNKQWHVE 300
  301 VY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 71.522879
Match: 1jb9A
Description: Ferredoxin reductase (flavodoxin reductase) N-terminal domain; Ferredoxin reductase (flavodoxin reductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.923682288946602 bayes_pls_golite062009
oxidoreductase activity 0.6192827046908 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle