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View Structure Prediction Details

Protein: draT2
Organism: Rhodopseudomonas palustris CGA009
Length: 290 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for draT2.

Description E-value Query
Range
Subject
Range
gi|23014580 - gi|23014580|ref|ZP_00054389.1| hypothetical protein Magn03009023 [Magnetospirillum magnetotacticum M...
482.0 [0..27] [290..8]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRQDDRSAP LAGVGTAEPA KVSEDGSIGH SSNLVGVPMR FLTGVGFNDA PVPLHIAGVR  60
   61 EMNPSLFEML GQARDLAEAG EAFACYMTAL FGIDAEQRVR GRDGRRRFRS SYLDLIKGWG 120
  121 FD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNGAEGAVLK GWVESRFGLF PTFHKEPIRR IASPVWTVYV EQKMSSRFHN NAIFVQLDLL  60
   61 YEFCQWALTH FAATGSTHIT LYRGVNGFDE HQVVERLDKR HCIIRLNNLT SFTSDRGVAD 120
  121 CFGDTILTVR VPVAKVLFFN KLLAAHPLKG EGEYLVIGGD YRVTASYF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle